Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein hsca | SAMEA3753064_03104 | Not Available | Positive | 3196653 - 3198503 | 65673.4 |
| ferredoxin | SAMEA3753064_03105 | Not Available | Positive | 3198505 - 3198840 | 12331.5 |
| fes assembly protein iscx | SAMEA3753064_03106 | Not Available | Positive | 3198852 - 3199052 | 7731.92 |
| peptidase b (aminopeptidase b) | SAMEA3753064_03107 | Not Available | Positive | 3199111 - 3200394 | 46214.6 |
| 3-mercaptopyruvate sulfurtransferase | SAMEA3753064_03109 | Not Available | Negative | 3201805 - 3202650 | 30799.5 |
| putative protease inhibitor | SAMEA3753064_03110 | Not Available | Positive | 3202857 - 3207818 | 181592.0 |
| penicillin-binding protein 1c | SAMEA3753064_03111 | Not Available | Positive | 3207819 - 3210131 | 85060.9 |
| nucleoside diphosphate kinase | SAMEA3753064_03112 | Not Available | Positive | 3210280 - 3210711 | 15464.3 |
| radical sam protein | SAMEA3753064_03113 | Not Available | Positive | 3210861 - 3212015 | 43088.0 |
| putative regulatory protein | SAMEA3753064_03114 | Not Available | Positive | 3212300 - 3213313 | 36176.5 |
Pathways
829 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





