Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 3-phenylpropionate permease | SAMEA3753064_03093 | Not Available | Positive | 3187924 - 3189063 | 41595.1 |
| stationary phase inducible protein csie | SAMEA3753064_03094 | Not Available | Negative | 3189055 - 3190335 | 48978.2 |
| peptidase | SAMEA3753064_03095 | Not Available | Negative | 3190526 - 3191380 | 31517.6 |
| inositol-1-monophosphatase | SAMEA3753064_03096 | Not Available | Negative | 3191525 - 3192328 | 29173.8 |
| putative rna methyltransferase | SAMEA3753064_03097 | Not Available | Positive | 3192447 - 3193187 | 27049.6 |
| fes cluster assembly transcription factor iscr | SAMEA3753064_03098 | Not Available | Positive | 3193457 - 3193945 | 17337.6 |
| cysteine desulfurase | SAMEA3753064_03100 | Not Available | Positive | 3194057 - 3195271 | 45092.2 |
| nifu-like protein | SAMEA3753064_03101 | Not Available | Positive | 3195299 - 3195685 | 13849.3 |
| iron-sulfur cluster assembly protein | SAMEA3753064_03102 | Not Available | Positive | 3195702 - 3196025 | 11556.7 |
| co-chaperone hscb | SAMEA3753064_03103 | Not Available | Positive | 3196121 - 3196636 | 20094.8 |
Pathways
852 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





