Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SAMEA3753064_03083 | Not Available | Positive | 3178945 - 3179943 | 34499.7 |
| putative zinc-binding dehydrogenase | SAMEA3753064_03084 | Not Available | Positive | 3180009 - 3181070 | 38052.1 |
| putative aldose 1-epimerase | SAMEA3753064_03085 | Not Available | Positive | 3181082 - 3181954 | 32718.1 |
| inner membrane protein | SAMEA3753064_03086 | Not Available | Negative | 3182002 - 3182424 | 15212.3 |
| 3-phenylpropionate dioxygenase ferredoxin--nad(+) reductase component | SAMEA3753064_03087 | Not Available | Negative | 3182521 - 3183723 | 43966.8 |
| 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase | SAMEA3753064_03088 | Not Available | Negative | 3183733 - 3184545 | 28471.3 |
| 3-phenylpropionate dioxygenase ferredoxin subunit | SAMEA3753064_03089 | Not Available | Negative | 3184542 - 3184862 | 11329.3 |
| 3-phenylpropionate dioxygenase beta subunit | SAMEA3753064_03090 | Not Available | Negative | 3184862 - 3185380 | 20561.3 |
| 3-phenylpropionate dioxygenase alpha subunit | SAMEA3753064_03091 | Not Available | Negative | 3185377 - 3186738 | 51111.8 |
| hca operon transcriptional activator | SAMEA3753064_03092 | Not Available | Positive | 3186874 - 3187764 | 32812.2 |
Pathways
906 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





