Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate transporter | SAMEA3753064_03040 | Not Available | Positive | 3130149 - 3131447 | 47007.2 |
| lipoprotein | SAMEA3753064_03041 | Not Available | Negative | 3131444 - 3131716 | 9931.43 |
| phosphatidylserine synthase | SAMEA3753064_03042 | Not Available | Negative | 3131813 - 3133168 | 52804.8 |
| putative acyl-coa synthetase | SAMEA3753064_03043 | Not Available | Negative | 3133282 - 3135942 | 97922.1 |
| dtw domain-containing protein | SAMEA3753064_03044 | Not Available | Negative | 3135974 - 3136672 | 25982.4 |
| thioredoxin 2 | SAMEA3753064_03045 | Not Available | Negative | 3136741 - 3137160 | 15555.6 |
| methyltransferase | SAMEA3753064_03046 | Not Available | Positive | 3137367 - 3138404 | 37786.5 |
| uracil-dna glycosylase | SAMEA3753064_03047 | Not Available | Negative | 3138452 - 3139141 | 25694.7 |
| autonomous glycyl radical cofactor | SAMEA3753064_03048 | Not Available | Positive | 3139446 - 3139829 | 14285.0 |
| putative transporter | SAMEA3753064_03049 | Not Available | Negative | 3139885 - 3140472 | 21221.4 |
Pathways
1143 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





