Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acriflavine resistance protein e | SAMEA3753064_03027 | Not Available | Positive | 3119806 - 3120963 | 41320.0 |
| putative integral transmembrane protein | SAMEA3753064_03028 | Not Available | Positive | 3120975 - 3121286 | 10953.2 |
| multidrug efflux system protein | SAMEA3753064_03029 | Not Available | Positive | 3121287 - 3124079 | 100474.0 |
| uncharacterised protein | SAMEA3753064_03030 | Not Available | Negative | 3123936 - 3124226 | 11039.8 |
| lipoprotein | SAMEA3753064_03031 | Not Available | Positive | 3124332 - 3124553 | 7452.14 |
| putative abc transporter, substrate-binding protein | SAMEA3753064_03032 | Not Available | Positive | 3124984 - 3126009 | 37034.8 |
| abc transporter permease | SAMEA3753064_03033 | Not Available | Positive | 3126077 - 3127258 | 43263.9 |
| abc transporter permease | SAMEA3753064_03034 | Not Available | Positive | 3127268 - 3128371 | 41485.7 |
| abc transporter atp-binding protein | SAMEA3753064_03035 | Not Available | Positive | 3128379 - 3129137 | 28594.0 |
| Trna-thr | Not Available | Not Available | Positive | 3129524 - 3129599 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





