Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit iii | SAMEA3753064_02997 | Not Available | Positive | 3086414 - 3086812 | 14961.7 |
| serine endoprotease | SAMEA3753064_02998 | Not Available | Positive | 3086966 - 3088333 | 47207.9 |
| protease | SAMEA3753064_02999 | Not Available | Positive | 3088423 - 3089490 | 37583.4 |
| malate dehydrogenase | SAMEA3753064_03000 | Not Available | Negative | 3089552 - 3090490 | 32339.2 |
| arginine repressor | SAMEA3753064_03001 | Not Available | Positive | 3090925 - 3091395 | 16995.5 |
| protein ycfr | SAMEA3753064_03002 | Not Available | Positive | 3091760 - 3092023 | 9178.85 |
| barnase inhibitor | SAMEA3753064_03003 | Not Available | Negative | 3092079 - 3092351 | 10766.7 |
| p-hydroxybenzoic acid efflux pump subunit b | SAMEA3753064_03004 | Not Available | Negative | 3092443 - 3094410 | 73614.9 |
| p-hydroxybenzoic acid efflux pump subunit a | SAMEA3753064_03005 | Not Available | Negative | 3094416 - 3095348 | 34776.5 |
| protein aaex | SAMEA3753064_03006 | Not Available | Negative | 3095356 - 3095559 | 7847.01 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





