Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | SAMEA3753064_02922 | Not Available | Negative | 3013380 - 3013883 | 18564.8 |
| sterol-binding protein | SAMEA3753064_02923 | Not Available | Negative | 3013877 - 3014401 | 19673.0 |
| protease yhbu | SAMEA3753064_02924 | Not Available | Positive | 3014610 - 3015605 | 37035.2 |
| putative peptidase | SAMEA3753064_02925 | Not Available | Positive | 3015614 - 3016492 | 32537.1 |
| monooxygenase | SAMEA3753064_02926 | Not Available | Positive | 3016698 - 3017705 | 37092.4 |
| tryptophan-specific transport protein | SAMEA3753064_02927 | Not Available | Negative | 3017823 - 3019067 | 44379.2 |
| atp-dependent rna helicase (dead-box protein) | SAMEA3753064_02928 | Not Available | Negative | 3019221 - 3021110 | 70550.5 |
| lipoprotein nlpi precursor | SAMEA3753064_02929 | Not Available | Negative | 3021290 - 3022174 | 33622.5 |
| polynucleotide phosphorylase | SAMEA3753064_02930 | Not Available | Negative | 3022283 - 3024418 | 77106.6 |
| trna pseudouridine synthase b | SAMEA3753064_02933 | Not Available | Negative | 3025083 - 3026027 | 35089.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





