Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative methyltransferase | SAMEA3753064_02912 | Not Available | Negative | 3005509 - 3006369 | 31349.7 |
| lipoprotein | SAMEA3753064_02913 | Not Available | Positive | 3006434 - 3008470 | 72831.3 |
| endonuclease-like protein | SAMEA3753064_02914 | Not Available | Positive | 3008428 - 3008823 | 14784.4 |
| dnaa initiator-associating protein diaa | SAMEA3753064_02915 | Not Available | Positive | 3008843 - 3009433 | 21107.3 |
| putative phospholipid-binding protein | SAMEA3753064_02916 | Not Available | Positive | 3009443 - 3010018 | 20029.1 |
| permease | SAMEA3753064_02917 | Not Available | Negative | 3010223 - 3011263 | 37235.8 |
| nucleoside-diphosphate-sugar epimerase | SAMEA3753064_02918 | Not Available | Negative | 3011336 - 3011971 | 23213.3 |
| putative general stress protein | SAMEA3753064_02919 | Not Available | Positive | 3012099 - 3012617 | 18859.4 |
| conserved protein, upf0306 family | SAMEA3753064_02920 | Not Available | Negative | 3012597 - 3013040 | 16777.2 |
| giy-yig nuclease superfamily protein | SAMEA3753064_02921 | Not Available | Positive | 3013082 - 3013393 | 11603.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





