Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tagatose-6-phosphate ketose/aldose isomerase | SAMEA3753064_02902 | Not Available | Positive | 2995009 - 2996163 | 41749.9 |
| tagatose-1,6-bisphosphate aldolase | SAMEA3753064_02903 | Not Available | Positive | 2996176 - 2997036 | 31295.4 |
| n-acetylgalactosamine-specific pts system eiib component 1 | SAMEA3753064_02904 | Not Available | Positive | 2997203 - 2997679 | 17609.3 |
| n-acetylgalactosamine-specific pts system eiic component 1 | SAMEA3753064_02905 | Not Available | Positive | 2997718 - 2998521 | 28646.5 |
| pts system n-acetylgalactosamine-specific transporter subunit iid | SAMEA3753064_02906 | Not Available | Positive | 2998511 - 2999302 | 28976.1 |
| putative galactosamine-6-phosphate isomerase | SAMEA3753064_02907 | Not Available | Positive | 2999357 - 3000058 | 25902.3 |
| fimbrial-like adhesin protein | SAMEA3753064_02908 | Not Available | Positive | 3000459 - 3001043 | 20579.1 |
| periplasmic pilin chaperone (lpfb-like) | SAMEA3753064_02909 | Not Available | Positive | 3001123 - 3001818 | 25649.8 |
| fimbrial usher family protein | SAMEA3753064_02910 | Not Available | Positive | 3001848 - 3004364 | 93730.5 |
| fimbrial protein | SAMEA3753064_02911 | Not Available | Positive | 3004375 - 3005466 | 38452.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





