Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactarate dehydratase | SAMEA3753064_02892 | Not Available | Positive | 2986030 - 2987601 | 56372.8 |
| htra suppressor protein | SAMEA3753064_02893 | Not Available | Positive | 2987750 - 2988085 | 12359.7 |
| toxin of the sohb(prlf)-yhav toxin-antitoxin system | SAMEA3753064_02894 | Not Available | Positive | 2988085 - 2988549 | 17778.0 |
| agar family transcriptional regulator | SAMEA3753064_02895 | Not Available | Negative | 2988604 - 2989413 | 29604.3 |
| putative tagatose 6-phosphate kinase | SAMEA3753064_02896 | Not Available | Positive | 2989662 - 2990942 | 47258.1 |
| pts system n-acetylgalactosamine-specific transporter subunit iib | SAMEA3753064_02897 | Not Available | Positive | 2990965 - 2991438 | 17056.8 |
| n-acetylgalactosamine-specific enzyme iic component of pts | SAMEA3753064_02898 | Not Available | Positive | 2991449 - 2992228 | 27350.5 |
| pts system n-acetylgalactosamine-specific transporter subunit iid | SAMEA3753064_02899 | Not Available | Positive | 2992218 - 2993096 | 31772.6 |
| n-acetylgalactosamine-specific pts system eiia component 2 | SAMEA3753064_02900 | Not Available | Positive | 2993114 - 2993548 | 15513.7 |
| n-acetylglucosamine-6-phosphate deacetylase (glcnac 6-p deacetylase) | SAMEA3753064_02901 | Not Available | Positive | 2993545 - 2994678 | 40259.8 |
Pathways
905 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





