Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate kinase/acetate kinase c, anaerobic | SAMEA3753064_02881 | Not Available | Negative | 2973305 - 2974513 | 43386.7 |
| threonine/serine transporter | SAMEA3753064_02882 | Not Available | Negative | 2974539 - 2975870 | 48881.8 |
| catabolic threonine dehydratase | SAMEA3753064_02883 | Not Available | Negative | 2975892 - 2976881 | 35234.5 |
| tdc operon transcriptional activator | SAMEA3753064_02884 | Not Available | Negative | 2976980 - 2977918 | 34540.9 |
| protein | SAMEA3753064_02885 | Not Available | Positive | 2978707 - 2979246 | 20577.6 |
| uncharacterised protein | SAMEA3753064_02886 | Not Available | Positive | 2979268 - 2980371 | 41759.5 |
| glycerate kinase | SAMEA3753064_02888 | Not Available | Negative | 2981373 - 2982518 | 39136.7 |
| tartronate semialdehyde reductase | SAMEA3753064_02889 | Not Available | Negative | 2982615 - 2983505 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | SAMEA3753064_02890 | Not Available | Negative | 2983535 - 2984305 | 27428.7 |
| galactarate transporter | SAMEA3753064_02891 | Not Available | Negative | 2984321 - 2985655 | 48972.0 |
Pathways
1146 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





