Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhah | SAMEA3753064_02871 | Not Available | Positive | 2963079 - 2963444 | 14281.7 |
| inner membrane protein | SAMEA3753064_02872 | Not Available | Positive | 2963686 - 2964042 | 13313.5 |
| lysr family transcriptional regulator | SAMEA3753064_02873 | Not Available | Negative | 2964093 - 2964989 | 33231.3 |
| pirin-related protein | SAMEA3753064_02874 | Not Available | Positive | 2965094 - 2965795 | 25927.0 |
| protein | SAMEA3753064_02875 | Not Available | Positive | 2965818 - 2965982 | 5935.07 |
| putative inner membrane protein | SAMEA3753064_02876 | Not Available | Negative | 2966194 - 2967504 | 45361.9 |
| transporter | SAMEA3753064_02877 | Not Available | Negative | 2967532 - 2968863 | 48317.6 |
| l-serine dehydratase | SAMEA3753064_02878 | Not Available | Negative | 2969138 - 2970502 | 48466.5 |
| tdcf protein | SAMEA3753064_02879 | Not Available | Negative | 2970574 - 2970963 | 14008.0 |
| keto-acid formate acetyltransferase | SAMEA3753064_02880 | Not Available | Negative | 2970977 - 2973271 | 85940.4 |
Pathways
886 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





