Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMEA3753064_02850 | Not Available | Positive | 2942726 - 2943712 | 36262.4 |
| putative ph-induced membrane-bound redox modulator | SAMEA3753064_02852 | Not Available | Positive | 2943995 - 2944960 | 35911.1 |
| putative transport protein | SAMEA3753064_02853 | Not Available | Positive | 2945359 - 2946603 | 43480.4 |
| inner membrane protein | SAMEA3753064_02854 | Not Available | Negative | 2946608 - 2947159 | 20618.8 |
| altronate hydrolase | SAMEA3753064_02855 | Not Available | Negative | 2947242 - 2948729 | 54126.2 |
| glucuronate isomerase | SAMEA3753064_02856 | Not Available | Negative | 2948744 - 2950156 | 53956.1 |
| hexuronate transporter | SAMEA3753064_02857 | Not Available | Positive | 2950639 - 2951937 | 46967.1 |
| putative minor pilin and initiator protein | SAMEA3753064_02858 | Not Available | Negative | 2952025 - 2953113 | 40457.0 |
| putative outer membrane usher protein | SAMEA3753064_02859 | Not Available | Negative | 2953110 - 2955794 | 98480.8 |
| cs1 type fimbrial major subunit | SAMEA3753064_02860 | Not Available | Negative | 2955886 - 2956386 | 17741.6 |
Pathways
923 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





