Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhsc element core protein rshc | SAMEA3753064_02820 | Not Available | Negative | 2907405 - 2908838 | 55249.9 |
| inner membrane protein | SAMEA3753064_02821 | Not Available | Negative | 2908956 - 2909282 | 12558.1 |
| rhsc element core protein rshc | SAMEA3753064_02822 | Not Available | Negative | 2909282 - 2911348 | 78974.6 |
| transposase | SAMEA3753064_02823 | Not Available | Positive | 2911819 - 2912184 | 13452.4 |
| is2 element protein | SAMEA3753064_02824 | Not Available | Positive | 2912142 - 2913053 | 34536.1 |
| uncharacterised protein | SAMEA3753064_02825 | Not Available | Positive | 2913161 - 2913472 | 11505.3 |
| malate transporter | SAMEA3753064_02826 | Not Available | Negative | 2913353 - 2913919 | 21453.0 |
| cp4-6 prophage protein | SAMEA3753064_02827 | Not Available | Negative | 2913947 - 2914561 | 23619.9 |
| cp4-6 prophage | SAMEA3753064_02828 | Not Available | Negative | 2914950 - 2915510 | 21218.1 |
| uncharacterised protein | SAMEA3753064_02829 | Not Available | Negative | 2915732 - 2916475 | 28622.5 |
Pathways
899 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





