Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamb/ycsf-family protein | SAMEA3753064_02810 | Not Available | Negative | 2897879 - 2898613 | 25880.0 |
| putative allophanate hydrolase subunit 2 | SAMEA3753064_02811 | Not Available | Negative | 2898603 - 2899535 | 34444.5 |
| putative allophanate hydrolase subunit 1 | SAMEA3753064_02812 | Not Available | Negative | 2899529 - 2900185 | 23948.0 |
| hydrolase-oxidase | SAMEA3753064_02813 | Not Available | Negative | 2900208 - 2900951 | 26894.0 |
| putative oligopeptide transporter | SAMEA3753064_02814 | Not Available | Positive | 2901222 - 2902703 | 54163.1 |
| deoxyribodipyrimidine photolyase, fad-binding | SAMEA3753064_02815 | Not Available | Negative | 2902745 - 2904163 | 53697.9 |
| photoreactivation-associated protein | SAMEA3753064_02816 | Not Available | Negative | 2904160 - 2904669 | 20212.4 |
| h repeat-associated protein | SAMEA3753064_02817 | Not Available | Negative | 2905096 - 2906139 | 39316.2 |
| transposase | SAMEA3753064_02818 | Not Available | Negative | 2906358 - 2906612 | 9567.55 |
| protein | SAMEA3753064_02819 | Not Available | Negative | 2906839 - 2907408 | 21962.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





