Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase hydrophobic membrane anchor protein | SAMEA3753064_02800 | Not Available | Negative | 2887865 - 2888212 | 12868.3 |
| succinate dehydrogenase cytochrome b556 large membrane subunit | SAMEA3753064_02801 | Not Available | Negative | 2888206 - 2888610 | 14948.9 |
| uncharacterised protein | SAMEA3753064_02802 | Not Available | Positive | 2888991 - 2889098 | 3827.66 |
| citrate synthase | SAMEA3753064_02803 | Not Available | Positive | 2889304 - 2890587 | 48017.7 |
| putative fimbrial-like adhesin protein | SAMEA3753064_02804 | Not Available | Positive | 2890977 - 2891543 | 19855.1 |
| outer membrane protein | SAMEA3753064_02805 | Not Available | Positive | 2891603 - 2894053 | 90215.5 |
| chaperone, papd family | SAMEA3753064_02806 | Not Available | Positive | 2894068 - 2894799 | 27199.9 |
| putative fimbrial protein | SAMEA3753064_02807 | Not Available | Positive | 2894796 - 2895857 | 39541.6 |
| transport protein abrb | SAMEA3753064_02808 | Not Available | Positive | 2896009 - 2897055 | 36839.0 |
| endonuclease viii (dna glycosylase/ap lyase nei) | SAMEA3753064_02809 | Not Available | Negative | 2897052 - 2897843 | 29836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





