Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein x | SAMEA3753064_02709 | Not Available | Negative | 2793321 - 2793836 | 18603.6 |
| threonine and homoserine efflux system | SAMEA3753064_02710 | Not Available | Positive | 2794189 - 2795076 | 31170.4 |
| dna starvation/stationary phase protection protein dps | SAMEA3753064_02711 | Not Available | Positive | 2795375 - 2795878 | 18696.3 |
| glutamine abc transporter, substrate-binding protein | SAMEA3753064_02712 | Not Available | Positive | 2796282 - 2797028 | 27191.5 |
| glutamine transport system permease | SAMEA3753064_02713 | Not Available | Positive | 2797167 - 2797826 | 24365.8 |
| glnq protein, subunit of glutamine abc transporter | SAMEA3753064_02714 | Not Available | Positive | 2797823 - 2798545 | 26732.6 |
| membrane protein ybio | SAMEA3753064_02715 | Not Available | Positive | 2798806 - 2801031 | 81908.5 |
| sam-dependent methyltransferase | SAMEA3753064_02716 | Not Available | Negative | 2801028 - 2801954 | 34227.8 |
| protein involved in colanic acid production | SAMEA3753064_02717 | Not Available | Positive | 2802230 - 2802490 | 8896.65 |
| catecholate siderophore tonb-dependent receptor | SAMEA3753064_02718 | Not Available | Positive | 2802755 - 2805037 | 81978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





