Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine abc transporter substrate-binding protein | SAMEA3753064_02668 | Not Available | Negative | 2749390 - 2750502 | 40799.6 |
| tpr repeat-containing protein | SAMEA3753064_02669 | Not Available | Negative | 2750853 - 2751329 | 17667.1 |
| ribosomal protein s6 modification protein | SAMEA3753064_02670 | Not Available | Negative | 2751417 - 2752319 | 32438.5 |
| nitroreductase nfsa | SAMEA3753064_02671 | Not Available | Negative | 2752380 - 2753102 | 26802.2 |
| inner membrane protein | SAMEA3753064_02672 | Not Available | Negative | 2753086 - 2753373 | 10521.4 |
| glutaredoxin | SAMEA3753064_02673 | Not Available | Positive | 2753533 - 2753790 | 9685.35 |
| inner membrane protein ybjm | SAMEA3753064_02674 | Not Available | Negative | 2753820 - 2754197 | 14204.0 |
| putative transport protein with two rck domains | SAMEA3753064_02675 | Not Available | Positive | 2754467 - 2756152 | 60355.1 |
| deor-type transcriptional regulator | SAMEA3753064_02677 | Not Available | Negative | 2756327 - 2756863 | 20369.6 |
| deor-type transcriptional regulator | SAMEA3753064_02678 | Not Available | Positive | 2757028 - 2758155 | 38642.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





