Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| issfl3 orfc | SAMEA3753064_02605 | Not Available | Positive | 2686977 - 2687834 | 31824.6 |
| transposase | SAMEA3753064_02606 | Not Available | Negative | 2687838 - 2689451 | 61352.2 |
| transposase | SAMEA3753064_02607 | Not Available | Negative | 2689482 - 2689832 | 13200.2 |
| putative transposase | SAMEA3753064_02608 | Not Available | Negative | 2689829 - 2690254 | 15853.1 |
| issfl3 orfc | SAMEA3753064_02609 | Not Available | Positive | 2690574 - 2691059 | 18605.6 |
| putative membraneprotein | SAMEA3753064_02611 | Not Available | Positive | 2692442 - 2693113 | 26323.3 |
| 50s ribosomal protein l31 | SAMEA3753064_02613 | Not Available | Negative | 2694426 - 2694689 | 9916.74 |
| trat | SAMEA3753064_02614 | Not Available | Positive | 2695113 - 2695241 | 4458.75 |
| transposase family protein | SAMEA3753064_02615 | Not Available | Positive | 2695303 - 2695644 | 12755.4 |
| uncharacterised protein | SAMEA3753064_02616 | Not Available | Negative | 2695598 - 2695861 | 9837.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





