Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | SAMEA3753064_02555 | Not Available | Negative | 2639469 - 2640416 | 34234.3 |
| putative sugar-bisphosphate aldolase | SAMEA3753064_02556 | Not Available | Negative | 2640421 - 2641257 | 30839.5 |
| putative zinc-binding dehydrogenase | SAMEA3753064_02557 | Not Available | Negative | 2641278 - 2642321 | 37789.1 |
| major facilitator superfamily protein | SAMEA3753064_02558 | Not Available | Negative | 2642338 - 2643717 | 49590.9 |
| zinc-type alcohol dehydrogenase-like protein ydjl | SAMEA3753064_02559 | Not Available | Negative | 2643744 - 2644820 | 38715.9 |
| putative cytoplasmic protein | SAMEA3753064_02560 | Not Available | Negative | 2645190 - 2645462 | 10238.4 |
| methionine sulfoxide reductase b | SAMEA3753064_02561 | Not Available | Negative | 2645504 - 2645917 | 15452.0 |
| glyceraldehyde 3-phosphate dehydrogenase a | SAMEA3753064_02562 | Not Available | Positive | 2646259 - 2647254 | 35534.5 |
| putative aldose 1-epimerase | SAMEA3753064_02563 | Not Available | Positive | 2647338 - 2648222 | 32673.8 |
| putative aldo/keto reductase | SAMEA3753064_02564 | Not Available | Negative | 2648273 - 2649127 | 30960.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





