Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dcmp deaminase | SAMEA3753064_03633 | Not Available | Negative | 3730177 - 3731910 | 66080.4 |
| Attr | Not Available | Not Available | Positive | 3732980 - 3732992 | Not Available |
| putative prophage protein | SAMEA3753064_04156 | Not Available | Positive | 4235557 - 4236294 | 28169.1 |
| putative prophage regulatory protein | SAMEA3753064_04157 | Not Available | Positive | 4236407 - 4236610 | 7563.26 |
| putative prophage protein | SAMEA3753064_04158 | Not Available | Positive | 4236610 - 4237041 | 16394.7 |
| Antirepressor | SAMEA3753064_04159 | Not Available | Positive | 4237054 - 4237887 | 31061.2 |
| putative prophage protein | SAMEA3753064_04160 | Not Available | Positive | 4237880 - 4238062 | 6891.25 |
| putative prophage protein | SAMEA3753064_04163 | Not Available | Positive | 4239116 - 4239310 | 6581.9 |
| putative prophage protein | SAMEA3753064_04164 | Not Available | Positive | 4239307 - 4239570 | 9809.78 |
| putative prophage protein | SAMEA3753064_04165 | Not Available | Positive | 4239567 - 4239788 | 8094.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





