Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 transport periplasmic protein (putative glutathione peroxidase) | SAMEA3753064_02493 | Not Available | Negative | 2577262 - 2577813 | 20426.5 |
| vitamin b12 abc transporter, permease protein | SAMEA3753064_02494 | Not Available | Negative | 2577876 - 2578856 | 35084.7 |
| phenylalanyl-trna synthetase subunit beta | SAMEA3753064_02496 | Not Available | Negative | 2579261 - 2581648 | 87357.2 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3753064_02497 | Not Available | Negative | 2581663 - 2582646 | 36803.9 |
| 50s ribosomal protein l20 | SAMEA3753064_02499 | Not Available | Negative | 2583096 - 2583452 | 13497.7 |
| 50s ribosomal subunit protein l35 | SAMEA3753064_02500 | Not Available | Negative | 2583505 - 2583702 | 7289.38 |
| translation initiation factor if-3 | SAMEA3753064_02501 | Not Available | Negative | 2583799 - 2584233 | 16638.4 |
| threonine trna synthetase | SAMEA3753064_02502 | Not Available | Negative | 2584345 - 2586273 | 74004.4 |
| putative type iii effector protein (ankyrin repeat protein b) | SAMEA3753064_02503 | Not Available | Positive | 2586796 - 2588694 | 70764.9 |
| putative transmembrane anchor protein | SAMEA3753064_02504 | Not Available | Positive | 2588870 - 2588977 | 4115.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





