Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3753064_02473 | Not Available | Positive | 2556214 - 2557479 | 46036.9 |
| quinate/shikimate dehydrogenase | SAMEA3753064_02474 | Not Available | Positive | 2557491 - 2558357 | 31229.6 |
| 3-dehydroquinate dehydratase | SAMEA3753064_02475 | Not Available | Positive | 2558388 - 2559146 | 27521.3 |
| putative coa transferase | SAMEA3753064_02476 | Not Available | Positive | 2559291 - 2560886 | 57530.6 |
| putative acyl-coa dehydrogenase | SAMEA3753064_02477 | Not Available | Positive | 2560900 - 2562051 | 43004.6 |
| arac family transcriptional regulator | SAMEA3753064_02478 | Not Available | Negative | 2562094 - 2563005 | 34896.2 |
| uncharacterised protein | SAMEA3753064_02479 | Not Available | Negative | 2563108 - 2563284 | 6478.01 |
| putative electron transfer flavoprotein beta subunit | SAMEA3753064_02480 | Not Available | Positive | 2563300 - 2564085 | 28303.1 |
| putative electron transfer flavoprotein subunit alpha | SAMEA3753064_02481 | Not Available | Positive | 2564105 - 2565043 | 33829.7 |
| putative flavoprotein | SAMEA3753064_02482 | Not Available | Positive | 2565099 - 2566388 | 45927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





