Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | SAMEA3753064_02419 | Not Available | Negative | 2502121 - 2503230 | 39516.7 |
| outer membrane lipoprotein | SAMEA3753064_02420 | Not Available | Positive | 2503504 - 2503971 | 15602.7 |
| transcriptional regulator slya | SAMEA3753064_02421 | Not Available | Negative | 2504018 - 2504452 | 16354.0 |
| inner membrane protein | SAMEA3753064_02422 | Not Available | Positive | 2504653 - 2504889 | 8891.33 |
| hlyd-family secretion protein | SAMEA3753064_02423 | Not Available | Positive | 2504892 - 2505749 | 31513.6 |
| putative efflux pump protein | SAMEA3753064_02424 | Not Available | Positive | 2505749 - 2507761 | 75271.0 |
| superoxide dismutase | SAMEA3753064_02425 | Not Available | Negative | 2507762 - 2508283 | 17682.0 |
| putative aldo/keto reductase | SAMEA3753064_02426 | Not Available | Negative | 2508364 - 2509260 | 33707.6 |
| putative fe-s protein | SAMEA3753064_02427 | Not Available | Negative | 2509309 - 2509548 | 9359.15 |
| tetr family transcriptional regulator | SAMEA3753064_02428 | Not Available | Positive | 2509651 - 2510250 | 22276.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





