Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p) transhydrogenase subunit alpha | SAMEA3753064_02379 | Not Available | Negative | 2460173 - 2461705 | 54578.5 |
| protein ydgh | SAMEA3753064_02380 | Not Available | Positive | 2462229 - 2463173 | 33874.9 |
| arginine/ornithine antiporter | SAMEA3753064_02381 | Not Available | Positive | 2463359 - 2464741 | 49445.4 |
| putative short chain dehydrogenase | SAMEA3753064_02382 | Not Available | Positive | 2464778 - 2465146 | 13227.2 |
| putative short chain dehydrogenase | SAMEA3753064_02383 | Not Available | Positive | 2465198 - 2465500 | 11123.3 |
| inner membrane protein associated with alginate biosynthesis | SAMEA3753064_02384 | Not Available | Negative | 2465497 - 2465832 | 12323.8 |
| dna-binding transcriptional regulator rsta | SAMEA3753064_02385 | Not Available | Positive | 2465961 - 2466680 | 26705.4 |
| two component sensor kinase | SAMEA3753064_02386 | Not Available | Positive | 2466684 - 2467985 | 49299.8 |
| dna replication terminus site-binding protein | SAMEA3753064_02387 | Not Available | Positive | 2468061 - 2468990 | 35743.1 |
| fumarate hydratase class ii | SAMEA3753064_02388 | Not Available | Negative | 2468987 - 2470390 | 50464.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





