Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative permease | SAMEA3753064_02158 | Not Available | Negative | 2251826 - 2253193 | 46761.0 |
| guanine deaminase | SAMEA3753064_02159 | Not Available | Negative | 2253229 - 2254545 | 50101.8 |
| putative purine permease | SAMEA3753064_02160 | Not Available | Negative | 2254563 - 2255963 | 49111.5 |
| selenate reductase subunit ygfn | SAMEA3753064_02161 | Not Available | Negative | 2256128 - 2258998 | 103527.0 |
| putative fad binding molybdopterin dehydrogenase | SAMEA3753064_02162 | Not Available | Negative | 2258995 - 2259774 | 28635.2 |
| putative amidohydrolase | SAMEA3753064_02163 | Not Available | Negative | 2259825 - 2261153 | 48887.3 |
| pyridine nucleotide-disulfide oxidoreductase | SAMEA3753064_02164 | Not Available | Negative | 2261156 - 2264254 | 115658.0 |
| ctp:molybdopterin cytidylyltransferase | SAMEA3753064_02165 | Not Available | Negative | 2264576 - 2265091 | 19246.5 |
| selenium-dependent hydroxylase accessory protein yqec | SAMEA3753064_02166 | Not Available | Positive | 2265257 - 2266027 | 28179.1 |
| nad(p)-binding rossman fold | SAMEA3753064_02167 | Not Available | Positive | 2266075 - 2267700 | 57697.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





