Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3753064_02015 | Not Available | Negative | 2103373 - 2103714 | 12553.0 |
| xylulose kinase | SAMEA3753064_02016 | Not Available | Negative | 2103883 - 2105337 | 52662.3 |
| d-xylose isomerase | SAMEA3753064_02017 | Not Available | Negative | 2105409 - 2106731 | 49749.7 |
| d-xylose transporter subunit xylf | SAMEA3753064_02018 | Not Available | Positive | 2107097 - 2108089 | 35722.1 |
| d-xylose transport atp-binding protein xylg | SAMEA3753064_02019 | Not Available | Positive | 2108167 - 2109708 | 56443.9 |
| xylose transport system permease xylh | SAMEA3753064_02020 | Not Available | Positive | 2109686 - 2110867 | 41033.5 |
| dna-binding transcriptional activator | SAMEA3753064_02021 | Not Available | Positive | 2110945 - 2112123 | 44871.7 |
| putative endo-beta-n-acetylglucosaminidase | SAMEA3753064_02022 | Not Available | Negative | 2112231 - 2113055 | 30869.3 |
| alpha-amylase | SAMEA3753064_02023 | Not Available | Positive | 2113375 - 2115405 | 75731.6 |
| class i and ii aminotransferase | SAMEA3753064_02024 | Not Available | Positive | 2115583 - 2116836 | 46689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





