Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3753064_01917 | Not Available | Positive | 1994997 - 1996046 | 38552.8 |
| 4'-phosphopantetheinyl transferase | SAMEA3753064_01918 | Not Available | Positive | 1996101 - 1996688 | 21738.9 |
| nickel abc transporter, substrate-binding protein | SAMEA3753064_01919 | Not Available | Positive | 1996799 - 1998373 | 58849.3 |
| nickel abc-transporter, permease protein | SAMEA3753064_01920 | Not Available | Positive | 1998373 - 1999317 | 35250.3 |
| nickel abc transporter, permease protein | SAMEA3753064_01921 | Not Available | Positive | 1999314 - 2000147 | 30363.8 |
| nickel abc transporter, atp-binding protein | SAMEA3753064_01922 | Not Available | Positive | 2000147 - 2000911 | 26835.1 |
| nickel abc transporter, atp-binding protein | SAMEA3753064_01923 | Not Available | Positive | 2000908 - 2001714 | 29730.5 |
| nickel responsive regulator | SAMEA3753064_01924 | Not Available | Positive | 2001720 - 2002121 | 15094.7 |
| hicb family protein | SAMEA3753064_01925 | Not Available | Negative | 2002241 - 2002600 | 13403.0 |
| putative transporter subunit: membrane component of abc superfamily | SAMEA3753064_01926 | Not Available | Negative | 2002931 - 2004055 | 41050.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





