Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3753064_02335 | Not Available | Negative | 2426643 - 2426954 | 12091.3 |
| Holin protein | SAMEA3753064_02336 | Not Available | Negative | 2426959 - 2427165 | 7394.97 |
| uncharacterised protein | SAMEA3753064_02337 | Not Available | Positive | 2427394 - 2427564 | 6372.68 |
| cold shock-like protein cspf | SAMEA3753064_02339 | Not Available | Positive | 2428444 - 2428656 | 7563.18 |
| Antitermination protein q | SAMEA3753064_02340 | Not Available | Negative | 2429078 - 2429830 | 27927.8 |
| Hypothetical protein | SAMEA3753064_02341 | Not Available | Negative | 2429844 - 2430893 | 39277.5 |
| putative prophage protein | SAMEA3753064_02342 | Not Available | Negative | 2431240 - 2431491 | 9235.26 |
| Host killer protein | SAMEA3753064_02343 | Not Available | Negative | 2431708 - 2431863 | 5737.24 |
| toxin of the rele-relb toxin-antitoxin system | SAMEA3753064_02344 | Not Available | Negative | 2431935 - 2432222 | 11225.8 |
| antitoxin of the rele-relb toxin-antitoxin system and transcriptional repressor of relbef | SAMEA3753064_02345 | Not Available | Negative | 2432222 - 2432461 | 9072.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





