Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, duf1107 family | SAMEA3753064_01663 | Not Available | Positive | 1738876 - 1739082 | 8072.24 |
| putative transporter | SAMEA3753064_01664 | Not Available | Negative | 1739144 - 1740487 | 49783.6 |
| methionine sulfoxide reductase a | SAMEA3753064_01666 | Not Available | Negative | 1740810 - 1741448 | 23316.3 |
| putative outer membrane protein assembly factor | SAMEA3753064_01667 | Not Available | Positive | 1741654 - 1743387 | 64799.7 |
| translocation and assembly module for autotransporter export, inner membrane subunit | SAMEA3753064_01668 | Not Available | Positive | 1743384 - 1747163 | 136908.0 |
| aig2 family protein | SAMEA3753064_01669 | Not Available | Positive | 1747166 - 1747507 | 12867.2 |
| inorganic pyrophosphatase | SAMEA3753064_01670 | Not Available | Negative | 1747887 - 1748417 | 19704.6 |
| abc transporter substrate-binding protein | SAMEA3753064_01671 | Not Available | Positive | 1748727 - 1749683 | 34362.6 |
| sugar transport system atp-binding protein | SAMEA3753064_01672 | Not Available | Positive | 1749823 - 1751325 | 55191.4 |
| abc transporter permease | SAMEA3753064_01673 | Not Available | Positive | 1751339 - 1752361 | 35460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





