Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type 22 kda peptidyl-prolyl cis-trans isomerase | SAMEA3753064_01653 | Not Available | Positive | 1728233 - 1728853 | 22217.5 |
| d-serine/d-alanine/glycine transporter | SAMEA3753064_01654 | Not Available | Positive | 1729162 - 1730574 | 51662.6 |
| regulator of cell morphogenesis and no signaling | SAMEA3753064_01655 | Not Available | Negative | 1730619 - 1731281 | 24956.1 |
| membrane protein ytff | SAMEA3753064_01656 | Not Available | Negative | 1731389 - 1732354 | 35225.6 |
| nad(p)h:quinone oxidoreductase | SAMEA3753064_01657 | Not Available | Negative | 1732462 - 1733322 | 29767.2 |
| putative transcriptional regulator ytfh | SAMEA3753064_01658 | Not Available | Positive | 1733411 - 1733791 | 14076.0 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein | SAMEA3753064_01659 | Not Available | Negative | 1733909 - 1735852 | 70926.0 |
| cysq protein | SAMEA3753064_01660 | Not Available | Positive | 1736042 - 1736782 | 27191.4 |
| uncharacterised protein | SAMEA3753064_01661 | Not Available | Positive | 1737235 - 1737906 | 25454.4 |
| protein ytfj | SAMEA3753064_01662 | Not Available | Negative | 1737996 - 1738550 | 20495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





