Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hflc protein | SAMEA3753064_01613 | Not Available | Positive | 1697475 - 1698479 | 37652.0 |
| membrane protein yjet | SAMEA3753064_01614 | Not Available | Positive | 1698561 - 1698758 | 7166.26 |
| adenylosuccinate synthetase | SAMEA3753064_01615 | Not Available | Positive | 1698862 - 1700160 | 47347.7 |
| transcriptional repressor nsrr | SAMEA3753064_01616 | Not Available | Positive | 1700365 - 1700790 | 15594.0 |
| exoribonuclease r | SAMEA3753064_01617 | Not Available | Positive | 1700829 - 1703270 | 92114.5 |
| 23s rrna (guanosine-2'-o-)-methyltransferase rlmb | SAMEA3753064_01618 | Not Available | Positive | 1703450 - 1704181 | 26558.3 |
| iclr-family transcriptional regulator | SAMEA3753064_01619 | Not Available | Negative | 1704258 - 1705037 | 29258.4 |
| putative lyase | SAMEA3753064_01620 | Not Available | Positive | 1705366 - 1706259 | 33549.8 |
| major facilitator superfamily protein | SAMEA3753064_01621 | Not Available | Positive | 1706310 - 1707611 | 46634.1 |
| putative d-galactarate dehydratase/altronate hydrolase | SAMEA3753064_01622 | Not Available | Positive | 1707639 - 1709240 | 58048.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





