Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753064_01562 | Not Available | Positive | 1647784 - 1647951 | 6206.95 |
| trna modification gtpase trme | SAMEA3753064_01563 | Not Available | Positive | 1648129 - 1648974 | 31625.8 |
| uncharacterised protein | SAMEA3753064_01564 | Not Available | Positive | 1648986 - 1649609 | 23831.2 |
| predicted gtpase | SAMEA3753064_01565 | Not Available | Positive | 1649611 - 1651449 | 68693.3 |
| bex protein | SAMEA3753064_01566 | Not Available | Positive | 1651463 - 1653115 | 62925.4 |
| inner membrane protein | SAMEA3753064_01567 | Not Available | Negative | 1653837 - 1654460 | 23250.8 |
| uncharacterised protein | SAMEA3753064_01568 | Not Available | Negative | 1654721 - 1654861 | 5350.42 |
| uncharacterised protein | SAMEA3753064_01569 | Not Available | Negative | 1655203 - 1655493 | 9376.23 |
| site-specific recombinase, phage integrase | SAMEA3753064_01570 | Not Available | Negative | 1655939 - 1657120 | 45268.7 |
| Trna-phe | Not Available | Not Available | Positive | 1657297 - 1657372 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





