Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor kinase | SAMEA3753064_01532 | Not Available | Negative | 1623253 - 1624884 | 60553.4 |
| uncharacterized conserved protein | SAMEA3753064_01533 | Not Available | Positive | 1625065 - 1625295 | 8650.47 |
| acyltransferase with acyl-coa n-acyltransferase domain | SAMEA3753064_01534 | Not Available | Positive | 1625307 - 1625579 | 10469.6 |
| protein | SAMEA3753064_01535 | Not Available | Positive | 1625806 - 1626102 | 11467.6 |
| putative inner membrane protein | SAMEA3753064_01536 | Not Available | Positive | 1626130 - 1626303 | 6555.44 |
| lysyl-trna synthetase | SAMEA3753064_01537 | Not Available | Negative | 1626422 - 1627939 | 57829.9 |
| putative oligopeptide transporter | SAMEA3753064_01538 | Not Available | Negative | 1628176 - 1629633 | 53043.7 |
| lysine decarboxylase 1 | SAMEA3753064_01539 | Not Available | Negative | 1629692 - 1631839 | 81264.7 |
| cadaverine/lysine antiporter | SAMEA3753064_01540 | Not Available | Negative | 1631919 - 1633253 | 46667.8 |
| transcriptional activator | SAMEA3753064_01541 | Not Available | Negative | 1633619 - 1635157 | 57856.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





