Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1446537 - 1446613 | Not Available |
| porin thermoregulatory protein | SAMEA3753064_01376 | Not Available | Negative | 1446659 - 1447420 | 28988.5 |
| uncharacterised protein | SAMEA3753064_01377 | Not Available | Negative | 1447603 - 1448493 | 33000.5 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3753064_01378 | Not Available | Negative | 1448494 - 1451466 | 111401.0 |
| bacteriophage n4 adsorption protein b | SAMEA3753064_01379 | Not Available | Negative | 1451453 - 1453690 | 85353.3 |
| h repeat-associated protein | SAMEA3753064_01380 | Not Available | Negative | 1453959 - 1455095 | 43194.9 |
| type iv secretion protein rhs | SAMEA3753064_01381 | Not Available | Negative | 1455199 - 1455510 | 12207.7 |
| uncharacterised protein | SAMEA3753064_01382 | Not Available | Negative | 1455625 - 1455846 | 8366.15 |
| rhs core protein with extension | SAMEA3753064_01383 | Not Available | Negative | 1455873 - 1458590 | 103044.0 |
| rhs core protein | SAMEA3753064_01384 | Not Available | Negative | 1458639 - 1460735 | 75477.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





