Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate hydrolase | SAMEA3753064_01344 | Not Available | Positive | 1414315 - 1414797 | 18223.6 |
| negative regulator of allantoin and glyoxylate utilization operons | SAMEA3753064_01345 | Not Available | Positive | 1414875 - 1415690 | 29271.4 |
| glyoxylate carboligase (tartronate-semialdehyde synthase) | SAMEA3753064_01346 | Not Available | Positive | 1415780 - 1417561 | 64735.5 |
| hydroxypyruvate isomerase | SAMEA3753064_01347 | Not Available | Positive | 1417574 - 1418350 | 29370.1 |
| 2-hydroxy-3-oxopropionate reductase | SAMEA3753064_01348 | Not Available | Positive | 1418450 - 1419328 | 30802.5 |
| putative allantoin permease | SAMEA3753064_01349 | Not Available | Positive | 1419497 - 1420951 | 52449.2 |
| allantoinase | SAMEA3753064_01350 | Not Available | Positive | 1421011 - 1422372 | 49588.4 |
| putative permease | SAMEA3753064_01351 | Not Available | Positive | 1422429 - 1423730 | 47228.2 |
| glycerate kinase ii | SAMEA3753064_01352 | Not Available | Positive | 1423752 - 1424897 | 38704.9 |
| putative glyoxylate utilization | SAMEA3753064_01354 | Not Available | Negative | 1425125 - 1425910 | 28692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





