Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3753064_01067 | Not Available | Negative | 1116248 - 1116409 | 6151.51 |
| Hypothetical protein | SAMEA3753064_01068 | Not Available | Negative | 1116406 - 1117086 | 25929.0 |
| Recombination protein bet | SAMEA3753064_01069 | Not Available | Negative | 1117083 - 1117868 | 29720.3 |
| Host-nuclease inhibitor protein gam | SAMEA3753064_01070 | Not Available | Negative | 1117874 - 1118170 | 11642.6 |
| Kil protein | SAMEA3753064_01071 | Not Available | Negative | 1118247 - 1118453 | 7717.32 |
| uncharacterised protein | SAMEA3753064_01072 | Not Available | Negative | 1118932 - 1119444 | 19521.4 |
| putative peptidase m, neutral zinc metallopeptidases, zinc-binding site | SAMEA3753064_01073 | Not Available | Negative | 1119441 - 1120580 | 43025.7 |
| Repressor protein | SAMEA3753064_01074 | Not Available | Negative | 1120710 - 1121195 | 18313.8 |
| Antirepressor protein | SAMEA3753064_01075 | Not Available | Positive | 1121513 - 1121740 | 7963.69 |
| Cii decision making protein | SAMEA3753064_01076 | Not Available | Positive | 1121771 - 1122310 | 20136.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





