Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bifunctional nicotinamide mononucleotide adenylyltransferase/adp-ribose pyrophosphatase | SAMEA3753064_01058 | Not Available | Negative | 1110634 - 1111095 | 17433.8 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | SAMEA3753064_01059 | Not Available | Negative | 1111105 - 1111758 | 24881.8 |
| isocitrate dehydrogenase | SAMEA3753064_01060 | Not Available | Positive | 1111930 - 1113180 | 45772.4 |
| Attl | Not Available | Not Available | Positive | 1112669 - 1112683 | Not Available |
| Integrase | SAMEA3753064_01061 | Not Available | Negative | 1113294 - 1114436 | 43916.8 |
| excisionase | SAMEA3753064_01062 | Not Available | Negative | 1114426 - 1114662 | 8845.89 |
| Hypothetical protein | SAMEA3753064_01063 | Not Available | Negative | 1114802 - 1115041 | 9477.5 |
| Hypothetical protein | SAMEA3753064_01064 | Not Available | Negative | 1115089 - 1115307 | 8258.85 |
| Hypothetical protein | SAMEA3753064_01065 | Not Available | Negative | 1115406 - 1115621 | 8095.86 |
| Dna n-6-adenine-methyltransferase | SAMEA3753064_01066 | Not Available | Negative | 1115698 - 1116255 | 20647.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





