Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator ykgd | SAMEA3753064_01159 | Not Available | Positive | 1212913 - 1213767 | 31532.4 |
| hydroxyacid oxidoreductase (fe-s centre) | SAMEA3753064_01160 | Not Available | Positive | 1214295 - 1215014 | 26069.9 |
| putative electron transport protein ykgf | SAMEA3753064_01161 | Not Available | Positive | 1215025 - 1216452 | 53055.0 |
| transporter | SAMEA3753064_01162 | Not Available | Positive | 1216445 - 1217140 | 25228.2 |
| inner membrane protein | SAMEA3753064_01163 | Not Available | Negative | 1217383 - 1218051 | 25590.3 |
| choline dehydrogenase | SAMEA3753064_01164 | Not Available | Negative | 1218264 - 1219934 | 61881.1 |
| betaine aldehyde dehydrogenase | SAMEA3753064_01165 | Not Available | Negative | 1219948 - 1221420 | 52899.1 |
| transcriptional regulator beti | SAMEA3753064_01166 | Not Available | Negative | 1221434 - 1222021 | 21806.4 |
| high-affinity choline transport protein (bcct-family transporter) | SAMEA3753064_01167 | Not Available | Positive | 1222150 - 1224183 | 75846.5 |
| putative signal transduction protein | SAMEA3753064_01168 | Not Available | Positive | 1225058 - 1226146 | 40727.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





