Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3753064_01088 | Not Available | Positive | 1131602 - 1132324 | 27212.7 |
| ribonuclease h | SAMEA3753064_01089 | Not Available | Negative | 1132321 - 1132788 | 17597.9 |
| dna polymerase iii subunit epsilon | SAMEA3753064_01090 | Not Available | Positive | 1132844 - 1133584 | 27389.9 |
| Trna-asp | Not Available | Not Available | Positive | 1133717 - 1133793 | Not Available |
| aminopeptidase | SAMEA3753064_01092 | Not Available | Positive | 1134121 - 1134906 | 29591.2 |
| uncharacterised protein | SAMEA3753064_01093 | Not Available | Negative | 1135043 - 1135522 | 18130.8 |
| inner membrane protein yafu | SAMEA3753064_01094 | Not Available | Negative | 1135532 - 1136446 | 34023.4 |
| hcp-like protein | SAMEA3753064_01095 | Not Available | Negative | 1136490 - 1136972 | 18000.5 |
| impa domain protein | SAMEA3753064_01096 | Not Available | Negative | 1136996 - 1138348 | 50765.5 |
| icmf-like protein | SAMEA3753064_01097 | Not Available | Negative | 1138359 - 1141883 | 134304.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





