Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lysogenization regulator | SAMEA3753064_01056 | Not Available | Negative | 1108797 - 1109438 | 22949.0 |
| pp_01011 | SAMEA3753064_01057 | Not Available | Negative | 1109474 - 1110580 | Not Available |
| uncharacterised protein | SAMEA3753064_01079 | Not Available | Negative | 1124115 - 1124543 | 15883.7 |
| Trna-asp | Not Available | Not Available | Positive | 1125493 - 1125569 | Not Available |
| 2,5-diketo-d-gluconic acid reductase b | SAMEA3753064_01082 | Not Available | Positive | 1125732 - 1126535 | 29438.4 |
| lysr family transcriptional regulator | SAMEA3753064_01083 | Not Available | Negative | 1126532 - 1127446 | 33793.8 |
| endonuclease/exonuclease/phosphatase family protein | SAMEA3753064_01084 | Not Available | Positive | 1127708 - 1128487 | 29128.3 |
| putative methyltransferase | SAMEA3753064_01085 | Not Available | Positive | 1128565 - 1129335 | 28363.6 |
| membrane-bound lytic murein transglycosylase d | SAMEA3753064_01086 | Not Available | Negative | 1129383 - 1130603 | 44680.6 |
| hydroxyacylglutathione hydrolase | SAMEA3753064_01087 | Not Available | Negative | 1130813 - 1131568 | 28462.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





