Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyaf | SAMEA3753064_00841 | Not Available | Positive | 914145 - 915002 | 31432.5 |
| cytochrome bd-ii oxidase subunit i | SAMEA3753064_00842 | Not Available | Positive | 915136 - 916680 | 57996.3 |
| cytochrome bd-ii oxidase subunit 2 | SAMEA3753064_00843 | Not Available | Positive | 916692 - 917828 | 42427.3 |
| small predicted membrane protein | SAMEA3753064_00844 | Not Available | Positive | 917841 - 917933 | 3597.68 |
| periplasmic appa protein | SAMEA3753064_00845 | Not Available | Positive | 918013 - 919311 | 47075.6 |
| cryptic autophosphorylating protein tyrosine kinase etk | SAMEA3753064_00846 | Not Available | Negative | 919431 - 921611 | 81290.6 |
| phosphotyrosine-protein phosphatase | SAMEA3753064_00847 | Not Available | Negative | 921631 - 922077 | 16386.9 |
| polysaccharide export protein | SAMEA3753064_00848 | Not Available | Negative | 922065 - 923204 | 41762.2 |
| putative lipoprotein | SAMEA3753064_00849 | Not Available | Negative | 923250 - 925346 | 78680.2 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3753064_00850 | Not Available | Negative | 925346 - 926092 | 27297.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





