Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Toxin-antitoxin system, putative toxin component | SAMEA3753064_01008 | Not Available | Negative | 1071909 - 1072208 | 11432.6 |
| Putative addiction module antidote protein | SAMEA3753064_01009 | Not Available | Negative | 1072214 - 1072471 | 9361.02 |
| Hypothetical protein | SAMEA3753064_01010 | Not Available | Positive | 1072881 - 1073936 | 39545.9 |
| Crossover junction endodeoxyribonuclease rusa | SAMEA3753064_01011 | Not Available | Positive | 1073937 - 1074302 | 13909.0 |
| Bacteriophage antiterminator protein q | SAMEA3753064_01012 | Not Available | Positive | 1074299 - 1074988 | 26361.7 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 1075198 - 1075273 | Not Available |
| Trna,type:lys,anti_codon:ttt; | Not Available | Not Available | Positive | 1075275 - 1075351 | Not Available |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 1075354 - 1075429 | Not Available |
| Trna,type:gly,anti_codon:tcc; | Not Available | Not Available | Positive | 1075433 - 1075507 | Not Available |
| uncharacterised protein | SAMEA3753064_01017 | Not Available | Negative | 1075799 - 1076053 | 9242.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





