Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | SAMEA3753064_00639 | Not Available | Negative | 690182 - 691402 | 42615.8 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc | SAMEA3753064_00640 | Not Available | Positive | 691561 - 693567 | 74438.1 |
| protein | SAMEA3753064_00641 | Not Available | Negative | 693688 - 693966 | 10000.6 |
| putative transporting atpase | SAMEA3753064_00642 | Not Available | Negative | 694000 - 694548 | 21130.6 |
| inner membrane protein | SAMEA3753064_00643 | Not Available | Negative | 694548 - 695357 | 28645.2 |
| penicillin-insensitive murein endopeptidase | SAMEA3753064_00644 | Not Available | Negative | 695357 - 696181 | 30063.3 |
| chorismate synthase | SAMEA3753064_00645 | Not Available | Negative | 696185 - 697270 | 39138.9 |
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3753064_00646 | Not Available | Negative | 697305 - 698237 | 35043.7 |
| smr protein/muts2 | SAMEA3753064_00647 | Not Available | Positive | 698403 - 698954 | 21014.5 |
| fimbrial protein | SAMEA3753064_00648 | Not Available | Negative | 699076 - 699843 | 27807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





