Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMEA3753064_00619 | Not Available | Positive | 671103 - 671465 | 14082.8 |
| nad(p)-binding rossmann-fold domain | SAMEA3753064_00620 | Not Available | Positive | 671486 - 672379 | 32686.7 |
| transposase | SAMEA3753064_00621 | Not Available | Negative | 672427 - 673317 | 34197.5 |
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3753064_00622 | Not Available | Negative | 673514 - 674287 | 28599.7 |
| histidine transport system permease hism | SAMEA3753064_00623 | Not Available | Negative | 674295 - 675011 | 26871.3 |
| histidine abc transporter permease | SAMEA3753064_00624 | Not Available | Negative | 675008 - 675694 | 24634.8 |
| histidine abc transporter, substrate-binding periplasmic protein | SAMEA3753064_00625 | Not Available | Negative | 675784 - 676566 | 28484.9 |
| lysine-arginine-ornithine-binding periplasmic protein | SAMEA3753064_00626 | Not Available | Negative | 676787 - 677569 | 27963.0 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | SAMEA3753064_00627 | Not Available | Negative | 677835 - 678404 | 20696.3 |
| amidophosphoribosyltransferase | SAMEA3753064_00628 | Not Available | Negative | 678499 - 680016 | 56491.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





