Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp59 | SAMEA3472147_00705 | Not Available | Negative | 779044 - 779751 | 25511.8 |
| Hypothetical protein | SAMEA3472147_00706 | Not Available | Positive | 780536 - 780769 | 8778.78 |
| Recombinase family protein | SAMEA3472147_00707 | Not Available | Positive | 781086 - 781676 | 21849.7 |
| Side tail fiber | SAMEA3472147_00709 | Not Available | Negative | 782349 - 785699 | 113205.0 |
| Putative lom-like outer membrane protein | SAMEA3472147_00710 | Not Available | Negative | 785764 - 786363 | 21781.1 |
| Putative tail tip assembly protein | SAMEA3472147_00711 | Not Available | Negative | 786431 - 789910 | 127397.0 |
| Tail assembly protein | SAMEA3472147_00712 | Not Available | Negative | 789971 - 790519 | 18869.8 |
| Putative tail protein | SAMEA3472147_00713 | Not Available | Negative | 790516 - 791115 | 23039.1 |
| Putative minor tail protein | SAMEA3472147_00714 | Not Available | Negative | 791265 - 791963 | 25678.0 |
| Putative minor tail protein | SAMEA3472147_00715 | Not Available | Negative | 791973 - 792302 | 12530.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Hemolytic uremic syndrome | Causes | PMC10648343 |
| Chronic mastitis | Causes | PMC11401738 |
| Colon carcinogenesis | Causes | PMC11704243 |
| Gastrointestinal infections | Causes | PMC3757591 |
| Infection and inflammation both of the bladder and kidneys | Causes | PMC8380466 |
| Urinary tract infections | Causes | PMC9147554 |
| Septicemia | Causes | PMC9147554 |
| Neonatal meningitis | Causes | PMC9147554 |
| Cardiovascular and central nervous system diseases | Causes | PMC9147554 |
| Enteric disease | Causes | PMC9147554 |





