Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial adhesin | SAMEA3472147_00656 | Not Available | Negative | 731873 - 732787 | 32013.3 |
| fimbrial protein | SAMEA3472147_00657 | Not Available | Negative | 732847 - 733350 | 18147.4 |
| putative fimbrial fimf precursor | SAMEA3472147_00658 | Not Available | Negative | 733363 - 733893 | 18921.6 |
| fimbrial usher protein | SAMEA3472147_00659 | Not Available | Negative | 733907 - 734455 | 19378.1 |
| transposase | SAMEA3472147_00660 | Not Available | Positive | 734675 - 735040 | 13452.4 |
| is2 element protein | SAMEA3472147_00661 | Not Available | Positive | 734998 - 735903 | 34327.9 |
| fimbrial biogenesis outer membrane usher protein | SAMEA3472147_00662 | Not Available | Negative | 735828 - 736391 | 21348.7 |
| outer membrane usher fmlc protein | SAMEA3472147_00663 | Not Available | Negative | 736455 - 736952 | 18413.8 |
| fimbrial chaperone | SAMEA3472147_00664 | Not Available | Negative | 736994 - 737719 | 26733.3 |
| type 1 fimbrial protein | SAMEA3472147_00665 | Not Available | Negative | 738064 - 738459 | 13604.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





