Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) | SAMEA3472147_00646 | Not Available | Negative | 714001 - 715536 | 55080.0 |
| glutamate decarboxylase beta | SAMEA3472147_00647 | Not Available | Negative | 715692 - 717092 | 52671.0 |
| membrane-associated peptidase | SAMEA3472147_00648 | Not Available | Negative | 717455 - 720238 | 104154.0 |
| tonb-dependent receptor | SAMEA3472147_00649 | Not Available | Negative | 720295 - 722667 | 89205.4 |
| abc transporter atp-binding protein/permease | SAMEA3472147_00650 | Not Available | Negative | 722705 - 724363 | 63934.1 |
| putative arylsulfatase-activating protein | SAMEA3472147_00651 | Not Available | Negative | 724681 - 725838 | 44521.4 |
| sulfatase yden | SAMEA3472147_00652 | Not Available | Negative | 725890 - 727572 | 62805.5 |
| arac family transcriptional regulator | SAMEA3472147_00653 | Not Available | Negative | 727974 - 728735 | 28825.0 |
| two-component system connector protein | SAMEA3472147_00654 | Not Available | Negative | 728810 - 729007 | 7328.15 |
| putative molybdopterin-binding oxidoreductase | SAMEA3472147_00655 | Not Available | Negative | 729255 - 731534 | 83499.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





