Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenazine biosynthesis protein phzf family protein | SAMEA3472147_00615 | Not Available | Negative | 677648 - 678541 | 32155.6 |
| respiratory nitrate reductase 2 gamma chain | SAMEA3472147_00616 | Not Available | Negative | 678620 - 679300 | 26005.5 |
| respiratory nitrate reductase 2 subunit delta | SAMEA3472147_00617 | Not Available | Negative | 679297 - 679992 | 26231.2 |
| respiratory nitrate reductase 2 subunit beta | SAMEA3472147_00618 | Not Available | Negative | 679992 - 681536 | 58529.0 |
| respiratory nitrate reductase 2 alpha chain | SAMEA3472147_00619 | Not Available | Negative | 681533 - 685273 | 140146.0 |
| nitrite extrusion protein 2 | SAMEA3472147_00620 | Not Available | Negative | 685368 - 686756 | 49984.1 |
| leucine-rich repeat protein | SAMEA3472147_00621 | Not Available | Negative | 687077 - 688333 | 48082.0 |
| putative type iii effector protein (leucine rich repeat protein) | SAMEA3472147_00622 | Not Available | Negative | 688396 - 689028 | 23806.7 |
| ipah-like protein | SAMEA3472147_00623 | Not Available | Negative | 689151 - 689654 | 18851.1 |
| outer membrane porin protein | SAMEA3472147_00624 | Not Available | Negative | 689824 - 690924 | 41053.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





