Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paar repeat-containing protein | SAMEA3472147_00605 | Not Available | Positive | 670761 - 671033 | 9345.16 |
| type vi secretion system rhs/vgr-family protein | SAMEA3472147_00606 | Not Available | Positive | 671063 - 672586 | 57672.9 |
| uncharacterised protein | SAMEA3472147_00607 | Not Available | Positive | 672703 - 673038 | 12471.7 |
| uncharacterised protein | SAMEA3472147_00608 | Not Available | Positive | 673013 - 673303 | 10773.3 |
| putative zinc-dependent metallopeptidase | SAMEA3472147_00609 | Not Available | Positive | 673492 - 674283 | 30646.5 |
| uncharacterised protein | SAMEA3472147_00610 | Not Available | Positive | 674307 - 674570 | 10081.6 |
| uncharacterised protein | SAMEA3472147_00611 | Not Available | Positive | 674594 - 675091 | 19526.5 |
| 4-oxalocrotonate tautomerase | SAMEA3472147_00612 | Not Available | Positive | 675734 - 675961 | 8488.22 |
| flavin reductase-like protein | SAMEA3472147_00613 | Not Available | Negative | 675965 - 676534 | 20918.1 |
| putative n-hydroxyarylamine o-acetyltransferase | SAMEA3472147_00614 | Not Available | Positive | 676707 - 677552 | 32321.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





